Table 1 Genome assembly and annotation of field pennycress
Genome features | Count |
|---|---|
Illumina PE150 reads (Gb) | 76.62 |
Nanopore reads (Gb) | 55.26 |
Hi-C reads (Gb) | 60.97 |
Total length of contigs (Mb) | 527.15 |
Total number of contigs | 3790 |
Longest length of contigs (Mb) | 22.18 |
Length of contig N50 (Mb) | 4.18 |
Number of contig N50 | 24 |
Total assembly size (Mb) | 527.3 |
Total anchored size (Mb) | 474.97 |
Total number of scaffolds | 2298 |
Longest length of scaffolds (Mb) | 75.83 |
Length of scaffold N50 (Mb) | 70.79 |
Number of scaffolds N50 | 4 |
GC content (%) | 39.03 |
Repeat content (%) | 70.19 |
BUSCO assessment (%) | 95.9% |
Number of predicted genes | 31,596 |