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Table 1 Ecological and genomic predictors of MIC

From: Large-scale genomic analysis of antimicrobial resistance in the zoonotic pathogen Streptococcus suis

Analysis

#strains

Fixed effects

Df

F

p

(a)

678

Antibiotic

15

1404.125

< 10−15

  

genetic cluster

29

40.644

< 10−15

(b)

450

Antibiotic

15

972.3107

< 10−4

  

Year

1

6.6078

0.0102

  

Serotype

1

6.6261

0.0101

  

Disease status

2

2.9760

0.0511

  

Country

3

92.5155

< 10−4

(c)

678

Antibiotic

15

1457.4043

< 10−4

  

Country

3

139.5902

< 10−4

(d)

557

Antibiotic

15

1144.3846

< 10−4

  

Disease status

2

9.9619

< 10−4

(e)

542

Antibiotic

15

1131.6347

< 10−4

  

Serotype

1

8.7216

0.0032

(f)

652

Antibiotic

15

1350.8781

< 10−4

  

Year

1

0.1591

0.69