Fig. 2

Temporal dynamics of Arabidopsis DEGs during infection reveal a significant alteration of cell wall biology and hormonal process in response to Fo5176. A Clusters of Arabidopsis coexpressed DEGs during infection using fuzzy c-means clustering. B Biological Processes Enriched in Selected Clusters from (A) using GO enrichment analysis. Enriched GO-terms are depicted as circles, lines connecting the circles show relation between GO-terms. In each group of GO-terms, the most significant category is labeled with the GO-term description. The genes downregulated over time during Fo5176 root colonization (coexpressed in cluster 3 in (A)) are enriched in plant cell wall biological processes (left panel, green). Cluster 7 (right panel) represents general defense responses (dark blue) and responses to hormonal signaling (light blue)