Table 3 Small RNA read mapping rates to the wheat and rust genomes. For each sample, the total number of reads and average mapping across the replicates are shown
Sample | Number of reads | Mapped to Pgt | Mapped to wheat |
|---|---|---|---|
Germinated spores | 27,536,477 | 55.93% | 0.73% |
Uninfected wheat | 2,353,359 | 3.56% | 70.34% |
Infected wheat 3dpi | 3,040,002 | 5.25% | 67.56% |
Infected wheat 5dpi | 2,914,397 | 5.37% | 66.98% |
Infected wheat 7dpi | 5,815,521 | 50.18% | 30.3% |