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Table 9 A higher proportion of CGs are methylated in TEs that have a sRNA mapping to them, suggesting an association between sRNAs and methylation

From: The stem rust fungus Puccinia graminis f. sp. tritici induces centromeric small RNAs during late infection that are associated with genome-wide DNA methylation

 

% of CG sites that are methylated in TEsRNA− (germinated spores)

% of CG sites that are methylated in TEsRNA+ (germinated spores)

% of CG sites that are methylated in TEsRNA− (late infection)

% of CG sites that are methylated in TEsRNA+ (late infection)

sRNAs up-regulated in germinated spores

49%

55.6%

44.3%

50.2%

sRNAs up-regulated in late infection

37.2%

63.5%

33.8%

57.2%

sRNAs with no differential expression

49%

57.3%

44.3%

51.1%

sRNAs with 22 nts and 5′ adenine

41.9%

68%

37.8%

61.5%