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Table 1 List of the ten genes that were most strongly associated with offspring number according to PA-association scores. All associations were confirmed by at least one of three methods from treeWAS [21]

From: Horizontal gene transfer-mediated bacterial strain variation affects host fitness in Drosophila

Gene name Annotation PA score treeWAS terminal treeWAS simultaneous treeWAS subsequent
    p-value p-value p-value
  Transposase 4.62 0.000009 0.013 0.003
ThiO Putative thiamine biosynthesis oxidoreductase 4.34 0.0002 0.003 0.02
ThiG Thiazole synthase 4.34 0.0002 0.003 0.02
ThiS Thiamine biosynthesis protein 4.34 0.0002 0.003 0.02
ThiC Thiamine biosynthesis protein 4.34 0.0002 0.003 0.02
ThiD Phosphomethylpyrimidine kinase 4.34 0.0002 0.003 0.02
  Ferric iron siderophore receptor 4.21 0.000009 0.11 0.001
  Oxidoreductase 4.21 0.000009 0.11 0.001
  LysR family transcriptional regulator 4.21 0.000009 0.11 0.001
  Methyltransferase domain protein 4.06 0.0003 0.009 0.89