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Table 1 List of the ten genes that were most strongly associated with offspring number according to PA-association scores. All associations were confirmed by at least one of three methods from treeWAS [21]

From: Horizontal gene transfer-mediated bacterial strain variation affects host fitness in Drosophila

Gene name

Annotation

PA score

treeWAS terminal

treeWAS simultaneous

treeWAS subsequent

   

p-value

p-value

p-value

 

Transposase

4.62

0.000009

0.013

0.003

ThiO

Putative thiamine biosynthesis oxidoreductase

4.34

0.0002

0.003

0.02

ThiG

Thiazole synthase

4.34

0.0002

0.003

0.02

ThiS

Thiamine biosynthesis protein

4.34

0.0002

0.003

0.02

ThiC

Thiamine biosynthesis protein

4.34

0.0002

0.003

0.02

ThiD

Phosphomethylpyrimidine kinase

4.34

0.0002

0.003

0.02

 

Ferric iron siderophore receptor

4.21

0.000009

0.11

0.001

 

Oxidoreductase

4.21

0.000009

0.11

0.001

 

LysR family transcriptional regulator

4.21

0.000009

0.11

0.001

 

Methyltransferase domain protein

4.06

0.0003

0.009

0.89