Table 1 Molecular evolutionary rates
Clade | ω | FUBAR (−)a | FUBAR (+)b | MEMEc | FUBAR and MEMEd |
|---|---|---|---|---|---|
3FTx (See Fig. 2A for modelling) | |||||
Elapidae | 1.17 | 5 | 13 | 15 | 10 |
Rear-fanged snakes with short N-terminal extension* | 1.51 | 2 | 8 | 12 | 7 |
Rear-fanged snakes with long N-terminal extension* | 1.37 | 2 | 14 | 22 | 14 |
Rear-fanged snakes without N-terminal extension | 1.30 | 8 | 20 | 27 | 19 |
Viperidae | 2.38 | 2 | 15 | 15 | 10 |
CRiSP (See Fig. 2B for modelling) | |||||
Elapidae-dominated clade | 1.34 | 9 | 33 | 29 | 22 |
Viperidae clade | 1.31 | 15 | 37 | 63 | 32 |
Rear-fanged snake dominated clade | 1.25 | 36 | 35 | 52 | 32 |
Kallikrein (See Fig. 2C for modelling) | |||||
Non-viperids | 0.70 | 26 | 11 | 11 | 6 |
Viperidae | 1.01 | 73 | 73 | 100 | 67 |
Kunitz (See Fig. 9A for modelling) | |||||
Viperidae clade | 0.96 | 1 | 8 | 8 | 4 |
Non-viperid clade | 1.18 | 5 | 10 | 13 | 6 |
Neurotoxins Dendrotoxins | 2.10 | 0 | 6 | 7 | 3 |
Neurotoxins Bungarotoxins | 1.23 | 15 | 25 | 30 | 22 |
Plasmin inhibitors Daboia | 0.80 | 1 | 0 | 2 | 0 |
Plasmin inhibitors Oxyuranus/ Pseudonaja | 0.62 | 2 | 0 | 0 | 0 |
Lectin (See Fig. 9B for modelling) | |||||
Ancestral (monomeric) | 0.72 | 44 | 14 | 31 | 14 |
Derived (dimeric) Non-viperids excluding Helicops) | 0.97 | 6 | 16 | 21 | 10 |
Derived (dimeric) Helicops | 1.16 | 0 | 6 | 7 | 3 |
Derived (dimeric) Viperidae-alpha | 1.40 | 23 | 54 | 60 | 49 |
Derived (dimeric) Viperidae-beta | 1.27 | 17 | 45 | 54 | 38 |