| [50 bp–100 bp[ | [100 bp–1 kb[ | [1 kb–10 kb[ | ≥ 10 kba | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Calling program | DELb | INSc | DUPd | INVe | DEL | INS | DUP | INV | DEL | INS | DUP | INV | DEL | DUP | INV |
asmvar | 11,018 | 3575 | 0 | 0 | 14,877 | 2243 | 0 | 0 | 5748 | 1 | 0 | 0 | 4681 | 0 | 0 |
manta | 9664 | 3358 | 453 | 0 | 12,378 | 1815 | 3114 | 0 | 11,463 | 0 | 4448 | 0 | 7325 | 5034 | 0 |
smoove | 4168 | 0 | 22 | 45 | 6489 | 0 | 1208 | 149 | 4687 | 0 | 981 | 33 | 1794 | 975 | 47 |
svaba | 7288 | 2284 | 673 | 21 | 6907 | 215 | 16,081 | 292 | 2969 | 0 | 1548 | 190 | 512 | 458 | 223 |
mergedf | 17,199 | 5023 | 656 | 61 | 22,980 | 3165 | 9810 | 296 | 13007 | 1 | 4316 | 135 | 10,640 | 4696 | 178 |