Fig. 6

TE and Chromatin architecture in the 12 vertebrate genomes. A Correlation between AB index and TE coverage for 12 species. The species associated with the fitted slope are labeled on the right. B Correlation between proportion of four TEs and chromatin contact frequency. C Enrichment of four TE types in enhancer and non-enhancer (all the other regions) regions of the genome in each species. D Spearman’s correlation of TE coverage in enhancer regions among 12 species (upper panels); and correlation between similarity of TE coverage in enhancer regions and evolutionary divergence time in 12 vertebrates (bottom panels)