Table 1 Summary of genome assembly and characteristics of B. jamesi and other three crustaceans
Species | B. jamesi | A. vulgare | L. vannamei | E. sinensis |
|---|---|---|---|---|
Genome size (bp) | 5,892,409,081 | 1,725,108,002 | 1,618,026,442 | 1,562,256,418 |
Number of Contigs | 22,827 | 52,740 | 50,304 | 12,722 |
Contig N50 (bp) | 587,279 | 38,359 | 57,650 | 26,045 |
Contig N90 (bp) | 108,712 | 18,318 | 14,641 | 2,670 |
Genome GC percent% | 37.28% | 29.15% | 35.68% | 46.39% |
BUSCOs coverage (%) | 94.80% | 91.38% | 94.00% | 91.20% |
Repeat percentage (%) | 85.32% | 69.54% | 49.39% | 45.30% |
Gene number | 23,221 | 19,051 | 25,572 | 28,033 |
Gene average length (bp) | 936 | 1259 | 1546 | 1078 |
Exon number per gene | 4.18 | 4.93 | 5.94 | 3.26 |
Exon average length (bp) | 223 | 181 | 260 | 330 |
Intron average length (bp) | 3010 | 1872 | 1484 | 1602 |