From: Rearrangement and domestication as drivers of Rosaceae mitogenome plasticity
ID | Species name | Subfamily | GenBank accession number | Genome size (bp) | Number of protein-coding genes | Number of rRNA | Number of tRNA | GC content (%) | Length of plastid-derived sequences (bp/%) |
---|---|---|---|---|---|---|---|---|---|
Ejap | Eriobotrya japonica | Amygdaloideae | NC_045228 | 434,980 | 34 | 3 | 23 | 45.42 | 2039 (0.47) |
Fana-C | Fragaria ananassa (“Camarosa”)a | Rosoideae | OM763767 | 285,543 | 30 | 3 | 17 | 44.96 | 19,176 (6.72) |
Fana-R | Fragaria ananassa (“Royal Royce”) | Rosoideae | OM763768 | 285,046 | 29 | 3 | 18 | 44.98 | 18,507 (6.49) |
Fiin | Fragaria iinumae | Rosoideae | OM763769 | 329,263 | 30 | 3 | 20 | 45.26 | 26,297 (7.99) |
Fman | Fragaria mandschurica | Rosoideae | ON478154 | 313,022 | 30 | 3 | 21 | 45.20 | 14,598 (4.66) |
Fnil | Fragaria nilgerrensis | Rosoideae | OM763770 | 315,210 | 29 | 3 | 19 | 45.26 | 11,742 (3.73) |
Fpen | Fragaria pentaphylla | Rosoideae | ON478155 | 290,970 | 30 | 3 | 19 | 45.07 | 12,360 (4.25) |
Fves | Fragaria vesca | Rosoideae | ON478179 | 312,993 | 30 | 3 | 20 | 45.20 | 14,340 (4.58) |
Fvir | Fragaria viridis | Rosoideae | ON478156 | 289,146 | 30 | 3 | 18 | 45.23 | 12,354 (4.27) |
Gurb | Geum urbanum | Rosoideae | ON556624 | 335,549 | 31 | 4 | 23 | 44.42 | 30,222 (9.01) |
Mbac | Malus baccata | Amygdaloideae | ON478159 | 400,769 | 33 | 3 | 20 | 45.40 | 4049 (1.01) |
Mdom-G | Malus domestica (“Gala”) | Amygdaloideae | ON478160 | 396,946 | 35 | 4 | 21 | 45.41 | 2187 (0.55) |
Mdom-Y | Malus domestica (“Yantai fuji 8”) | Amygdaloideae | MN964891 | 396,947 | 32 | 4 | 20 | 45.40 | 1968 (0.50) |
Msie | Malus sieversii | Amygdaloideae | ON478161 | 385,869 | 34 | 3 | 21 | 45.38 | 2140 (0.55) |
Msyl | Malus sylvestris | Amygdaloideae | ON478162 | 396,940 | 35 | 4 | 21 | 45.41 | 1968 (0.50) |
Pans | Potentilla anserina | Rosoideae | ON478170 | 294,682 | 28 | 3 | 21 | 44.46 | 14,320 (4.86) |
Parm | Prunus armeniaca | Amygdaloideae | ON478164 | 510,346 | 36 | 3 | 24 | 45.43 | 5483 (1.07) |
Pavi-G | Prunus avium (“Glory”) | Amygdaloideae | ON478157 | 444,576 | 36 | 3 | 23 | 45.62 | 3887 (0.87) |
Pavi-S | Prunus avium (“Staccato”) | Amygdaloideae | ON478178 | 444,576 | 36 | 3 | 23 | 45.62 | 3887 (0.87) |
Pbet | Pyrus betulifolia | Amygdaloideae | ON478165 | 432,493 | 35 | 3 | 20 | 45.21 | 2039 (0.47) |
Pbre-D | Pyrus bretschneideri (“Dangshansuli”) | Amygdaloideae | OM763766 | 458,897 | 37 | 3 | 21 | 45.21 | 3901 (0.85) |
Pbre-Y | Pyrus bretschneideri (“Yali”) | Amygdaloideae | ON478180 | 458,895 | 37 | 3 | 21 | 45.21 | 3900 (0.85) |
Pcom | Pyrus communis | Amygdaloideae | ON478166 | 443,525 | 35 | 3 | 20 | 45.24 | 4195 (0.95) |
Pkan | Prunus kanzakura | Amygdaloideae | ON478167 | 422,215 | 35 | 3 | 27 | 45.54 | 3975 (0.94) |
Pmir | Prunus mira | Amygdaloideae | ON478168 | 429,732 | 35 | 3 | 28 | 45.59 | 2320 (0.54) |
Pmum | Prunus mume | Amygdaloideae | ON478169 | 535,727 | 35 | 3 | 28 | 45.45 | 5768 (1.08) |
Psal | Prunus salicina | Amygdaloideae | ON478171 | 508,005 | 39 | 3 | 23 | 45.43 | 3057 (0.60) |
Pser | Photinia serratifolia | Amygdaloideae | ON556623 | 473,561 | 34 | 4 | 21 | 45.25 | 2062 (0.44) |
Psib | Prunus sibirica | Amygdaloideae | ON478172 | 510,187 | 35 | 3 | 26 | 45.42 | 5905 (1.16) |
Pyed | Prunus yedoensis | Amygdaloideae | ON478173 | 456,900 | 35 | 3 | 26 | 45.56 | 3883 (0.85) |
Pysb | Pyrus sinkiangensis x bretschneideri (“Hongxiangsu”) | Amygdaloideae | ON478158 | 441,852 | 35 | 3 | 20 | 45.21 | 2039 (0.46) |
Pyuc | Pyrus ussuriensis x communis (“No.1 Zhongai”) | Amygdaloideae | ON478163 | 441,853 | 35 | 3 | 20 | 45.21 | 2039 (0.46) |
Rochi | Rosa chinensis | Rosoideae | ON478174 | 277,763 | 31 | 3 | 18 | 45.35 | 6000 (2.16) |
Rorug | Rosa rugosa | Rosoideae | ON478175 | 302,947 | 31 | 3 | 20 | 45.24 | 8863 (2.93) |
Ruchi | Rubus chingii | Rosoideae | ON478176 | 472,138 | 32 | 3 | 35 | 43.31 | 77,163 (16.34) |
Sauc | Sorbus aucuparia | Amygdaloideae | NC_052880 | 384,977 | 33 | 2 | 23 | 45.39 | 3763 (0.98) |
Spoh | Sorbus pohuashanensis | Amygdaloideae | ON478177 | 396,857 | 32 | 3 | 20 | 45.36 | 3044 (0.77) |
Stor | Sorbus torminalis | Amygdaloideae | NC_052879 | 386,758 | 31 | 3 | 18 | 45.31 | 3837 (0.99) |