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Fig. 3 | BMC Biology

Fig. 3

From: Chromatin accessibility illuminates single-cell regulatory dynamics of rice root tips

Fig. 3

Chromatin accessibility trajectory of epidermal and root hair cells. a UMAP visualization of the root hair developmental trajectory depicting pseudotime (left) and cell types (right). b UMAP visualization of pseudotime of chromatin accessibility (top) and gene expression (bottom) for the root hair marker gene LOC_Os10g42750. c Cluster-aggregated chromatin accessibility surrounding the gene LOC_Os10g42750 for cells of root hair. A WRKY was indicated in the ACR of LOC_Os10g42750. d UMAP visualization showing cell type-specific expression of WRKY TF LOC_Os04g50920. Colour bar indicates the scaled expression level

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