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Fig. 2 | BMC Biology

Fig. 2

From: Microbiota-host crosstalk in the newborn and adult rumen at single-cell resolution

Fig. 2

Dissection of the immune and non-immune cell composition in NB and AD rumen tissues. A UMAP plots of immune cells, with each cell color coded to indicate the associated cell types. B The violin plots showing gene expression of markers of each immune cell types. C Bar graph showing the relative percentages of different immune cell types in newborn calves and adult cattle. D UMAP plots of non-immune cells, with each cell color coded to indicate the associated cell types. E The dot plot visualization of each cell type in rumen non-immune cell data. Dot size represents the percentage of cells within a cell type, and the color encodes the expression level. F The cell-type contribution bar charts show the distribution of cell types in NB and AD rumen samples. NB: newborn; AD: adult. NKT: natural killer T cells, DC: dendritic cells; MC1: mitotic cell 1; MC2: mitotic cell 2; BC1: basal cell 1; BC2: basal cell 2; BC3: basal cell 3; SC1: spinous cell 1; SC2: spinous cell 2; cg-like SC: channel-gap-like spinous cell; GC1: granule cell 1; GC2: granule cell 2; GC3: granule cell 3; TNFRSF6B+ EC: TNFRSF6B+ epithelial cell; IGFBP3+ EC: IGFBP3+ epithelial cell; VEC: vascular endothelial cell

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