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Table 1 General features of Oltmannsiellopsis and other chlorophyte cpDNAs

From: The complete chloroplast DNA sequence of the green alga Oltmannsiellopsis viridis reveals a distinctive quadripartite architecture in the chloroplast genome of early diverging ulvophytes

Feature

Nephroselmis

Chlorella

Oltmannsiellopsis

Pseudendoclonium

Chlamydomonas

Size (bp)

     

   Total

200,799

150,613

151,933

195,867

203,827

   IR

46,137

--a

18,510

6,039

22,211

   LSC

92,126

--a

33,610

140,914

81,307b

   SSC

16,399

--a

81,303

42,875

78,088b

A+T (%)

57.9

68.4

59.5

68.5

65.5

Coding sequences (%)c

68.7

60.9

59.2

62.3

50.1

Genes (no.)d

128

112

105

105

94

Introns (no.)

     

   Group I

0

3

5

27

5

   Group II

0

0

0

0

2

  1. a Because Chlorella cpDNA lacks an IR, only the total size of this genome is given.
  2. b The LSC and SSC regions of Chlamydomonas cpDNA cannot be distinguished unambiguously.
  3. c Conserved genes, unique ORFs and introns were considered as coding sequences.
  4. d Genes present in the IR were counted only once. Unique ORFs and intron ORFs were not taken into account.