Region | Length range (bp) | Alignment length (bp) | Base changes (variable/parsimony-informative/parsimony-informative excluding outgroup) | Indels (parsimony-informative/parsimony-informative excluding outgroup) | % GC content | Nucleotide diversity, Î (total) | Tajima's D (overall/coding region) | Nucleotide substitution model |
---|---|---|---|---|---|---|---|---|
rpl32-trnL | 426-448 | 470 | 46/19/11 | 8/2 | 26 | Â | Â | TrN+I+G I = 0.69 G = 0.65 |
rpoB-trnC | 419-430 | 449 | 37/27/3 | 8/5 | 30 | Â | Â | F81+I I = 0.95 |
trnH-psbA | 454-458 | 460 | 29/20/9 | 1/0 | 36 | Â | Â | F81+G G = 0.01 |
CDO504 A | 406-409 | 434 | 49/38/3 | 7/2 | 48 | 0.0050 | -2.81***/-2.25** | F81 |
CDO504 B | 389-432 | 467 | 86/56/17 | 12/8 | 48 | 0.010 | -2.67***/-1.97* | TIM+G G = 0.59 |
DMC1 A | 454-458 | 470 | 52/29/9 | 10/4 | 40 | 0.0024 | -2.67***/(-1.76) | F81+G G = 0.67 |
DMC1 B | 428-451 | 461 | 52/34/9 | 7/4 | 39 | 0.0032 | -2.27**/(-0.56) | HKY+G G = 0.60 Ti/Tv = 0.87 |