Fig. 1
From: Hybridisation has shaped a recent radiation of grass-feeding aphids
New chromosome-scale assemblies of S. miscanthi and S. avenae are high quality and show conserved synteny. a Hi-C contact map for the S. miscanthi v1 genome assembly. Blue lines show chromosome-scale super scaffolds. Arrows indicate likely assembly errors. Genomic scaffolds are ordered from longest to shortest with the x- and y-axis showing cumulative length in millions of base pairs (Mb). b Hi-C contact map for the S. miscanthi v2 genome assembly. Green lines show contigs. c Hi-C contact map for the S. avenae v2.1 genome assembly. d Dot plot showing a MashMap [41] whole genome alignment between the S. miscanthi v2 and S. avenae v2.1 genome assemblies. For clarity, only chromosome-scale scaffolds are included. Scaffolds in each assembly are ordered from longest to shortest. The x- and y-axis show cumulative scaffold length in Mb