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Fig. 4 | BMC Biology

Fig. 4

From: Analysis of five near-complete genome assemblies of the tomato pathogen Cladosporium fulvum uncovers additional accessory chromosomes and structural variations induced by transposable elements effecting the loss of avirulence genes

Fig. 4

SVs in the genome of Cladosporium fulvum are mostly located in repeat-rich regions. The figure shows diagrams of the 13 chromosomes of C. fulvum isolate Race 0WU as rectangles with two tracks, representing gene content (top track) and repetitive DNA content (bottom track). Location of SVs (i.e., INDELs longer than 200 bp) is shown as upward (insertion) or downward (deletions) triangles for the four isolates compared to isolate Race 0WU. SVs that affect predicted genes are highlighted with vertical blue lines, and as shown by the figure, overall SVs tend to not affect protein-coding genes. The SVs that resulted in the deletion of Avr4E and Avr5 are labeled

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BMC Biology

ISSN: 1741-7007

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