Skip to main content
Fig. 5 | BMC Biology

Fig. 5

From: Analysis of five near-complete genome assemblies of the tomato pathogen Cladosporium fulvum uncovers additional accessory chromosomes and structural variations induced by transposable elements effecting the loss of avirulence genes

Fig. 5

Duplicated segments between a core and a dispensable chromosome of Cladosporium fulvum isolate Race 0WU. A Intra- and interchromosomal duplications within the first 50 kb of Chr15. A tandem duplication of 12.9 kb fragment is shown. This duplication harbors pseudogenized copies of the candidate effector genes Ecp13 and CE29, for which the functional copies are located 12 kb from the right telomere of Chr6. Underscores followed by numbers were used to distinguish copies of Ecp13 and CE29. The figure also shows another 7.5 kb fragment having one copy in Chr15 and another copy at 40 kb from the left telomere of Chr6. B and C show the alignments of the coding sequences of Ecp13 and CE29 with their pseudogenized copies. Conserved nucleotides are represented by dots. Codons that harbor predicted loss-of-function substitutions are indicated

Back to article page

BMC Biology

ISSN: 1741-7007

Contact us