Fig. 6
Transcriptome responses in wild Theobroma species reveal orthologous defenses. A Venn diagrams displaying overlap between genes that are differentially expressed in at least one population of T. cacao and supertranscripts that are differentially expressed in 4 (top), 2–3 (middle), or 1 (bottom) non-cacao Theobroma species. B Log2 fold changes (± SE) for genes and superstranscripts from closely related Theobroma species in orthogroup 60, berberine bridge enzymes. Cladogram represents gene family relationships. C Log2 fold changes (± SE) for genes and superstranscripts from closely related Theobroma species in orthogroup 361, WRKY transcription factors. Cladogram represents gene family relationships