Fig. 4

Expression regulation patterns of the “All Strain”-responsive gene set responsive TF encoding genes along with the infection progress “Recital.” The structure of gene and sample data sets were determined by HAC based on Ward’s minimum variance method using the z-score transformed gene expression values. Heatmap color scales represent the z-score transformed expression values of the TF genes from the All strain-responsive gene set for each condition. The clustering on top of the heatmap represents the experimental conditions which are labeled according to the factors infection progress and treatment. On the right side of the heatmap, TF genes were grouped and colored according to their TF family