| ΔBbOsrR1 | ΔBbOsrR2 | ΔBbOsrR3 |
---|---|---|---|
RNA-seqa | |||
 Normal | 695 up/518 down | 616 up/344 down | 1016 up/783 down |
 H2O2 stress | 630 up/712 down | 318 up/369 down | 324 up/ 311 down |
 Menadione stress | / | 346 up/508 down | 830 up/954 down |
ChIP-seq | |||
 Normal | 340 | 1109 | 43 |
 H2O2 stress | 40 | 926 | 36 |
 Menadione stress | / | 285 | 56 |
Direct targets genes (In both RNA-seq and ChIP-seq datasets) | |||
 Normal | 41 up/19 down | 94 up/39 down | 8 up/2 down |
 H2O2 stress | 6 up | 84 up/62 down | 5 up/2 down |
 Menadione stress | / | 10 up/54 down | 10 up/4 down |
Additional information | |||
 Putative binding site sequence | BGGYGRCGGHGGCGG | CKYCGBSGYCG | CCYCSSYRAC |
 Binding site verified (EMSA) | CatA (BBA_06186), BbOsrR2 (BBA_04239), BbClp1 (BBA_07582) | Msg5 (BBA_09275), hypothetical protein gene (BBA_06338), Mcm1 (BBA_06763) | Fus3 (BBA_01244), hypothetical protein gene (BBA_06338) |