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Table 1 Statistics of rice chromosomes 11 and 12

From: The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications

Feature

Statistics

 

Chr11

Chr12

Total number of BACs/PACs

255

269

Total BAC length (Mb)

35.5

33.5

Total nonoverlapping sequence (Mb)

28.4

27.5

Short arm (Mb)

12.0

12.0

Long arm (Mb)

16.4

15.5

Integrated genetic markers

283(loci)

269(loci)

G+C Content

  

   Overall

42.8

43.0

   Exons

51.6

51.8

   Introns

38.7

38.8

   Intergenic regions

40.8

41.0

Total number of genesa

4,286(3,148)

4,169(2,845)

   Known/Putative genes

2,364(55.2%)

2,395(57.4%)

   Expressed genes

328(7.7%)

336(8.1%)

   Hypothetical genes

1,594(37.2)

1,438(34.5%)

Gene density (kb)b

6.6(9.0)

6.6(9.7)

Average gene length (bp)c

2,603

2,589

Total number of gene models

4,436

4,355

   Average exon size (bp)

350

339

   Average intron size (bp)

378

371

   Average number exons per gene model

4.1

4.2

  1. a Total number of genes includes the TE-related genes and the non-TE-related genes.
  2. b Gene density is reported for all genes and non-TE-related genes (in parentheses).
  3. c Average length of the genes is determined using the length of from the start codon to stop codon of the longest isoform.