Skip to main content

Table 4 Transposon classification.

From: Complete reannotation of the Arabidopsis genome: methods, tools, protocols and the final release

Transposable element classification # Annotated genomic regions
Class I (Retrotransposons) 1652
gypsy-like retrotransposon family (Athila) 511
gypsy-like retrotransposon family 374
copia-like retrotransposon family 494
non-LTR retrotransposon family (LINE) 264
other 9
Class II (DNA transposons) 703
hAT-like transposase family (hobo/Ac/Tam3) 77
CACTA-like transposase family (En/Spm) 69
CACTA-like transposase family (Ptta/En/Spm) 127
CACTA-like transposase family (Tnp1/En/Spm) 37
CACTA-like transposase family (Tnp2/En/Spm) 102
Mutator-like transposase family 268
Mariner-like transposase family 9
other 14