Figure 7

Distance tree of finTRIM B30.2 domains and related sequences. The domain organization of finTRIM and NLR proteins is represented in (A). A typical alignment of the B30.2 protein sequences from group A ftr (ftr35) and NLR (chr5_32382364) is shown in (B). B30.2 domains of the zebrafish fintrims and btrs as well as those extracted from related trims of other vertebrates (human and xenopus trim16, human trim39, Atlantic salmon, zebrafish, xenopus, chicken and human trim25; see Figure 4 for accession numbers) were aligned with related B30.2 sequences from nlrs, and a distance tree was produced using mega4 (NJ, boostrap = 1000); high bootstrap values of key nodes are indicated (C).