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Table 4 Sequence correction statistics. The number and proportion of classes of sequence corrections are given, calculated using the total number of genome bases mapped by the cDNA reads at coverage >10 (77,335,202). INDELs of three or more were binned together as their individual contribution to variance was less than 1%

From: De novo assembly of the complex genome of Nippostrongylus brasiliensis using MinION long reads

Count Proportion (of variants) Proportion (of bases) Original Corrected
312,140 44.2% 0.404% . N [1 bp INS]
65,725 9.3% 0.085% A G
64,702 9.2% 0.084% T C
48,786 6.9% 0.063% .. NN [2 bp INS]
33,471 4.7% 0.043% C T
33,348 4.7% 0.043% G A
33,163 4.7% 0.043% N . [1 bp DEL]
19,452 2.8% 0.024% …+ NNN+ [3+ bp INS]
13,435 1.9% 0.017% T A
13,215 1.9% 0.017% A T
11,925 1.7% 0.015% T G
11,617 1.6% 0.015% A C
9681 1.4% 0.013% G C
9524 1.3% 0.012% C A
9469 1.3% 0.012% C G
9442 1.3% 0.012% G T
4188 0.6% 0.005% NN .. [2 bp DEL]
3444 0.5% 0.004% NNN+ …+ [3+ bp DEL]