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Table 1 Summary of hypothesis testing results for the six gene families tested

From: Strigolactone synthesis is ancestral in land plants, but canonical strigolactone signalling is a flowering plant innovation

Dataset

Tree

logL

p-WKH

p-WSH

p-AU

D27

Phylobayes_tree_AA

− 29,047.235

0.0037

0.0056

0.0024

D27

Raxml_tree_AA

− 29,033.177

0.0181

0.0351

0.017

D27

IQ_tree_Nucl

− 28,989.821

0.9819

0.9901

0.9872

LBO

Phylobayes_tree_AA

− 14,392.989

0.0619

0.104

0.0339

LBO

Raxml_tree_AA

− 14,384.488

0.938

0.997

0.971

LBO

IQ_tree_Nucl

− 14,454.098

0.0008

0.0009

0.000624

MAX1

Phylobayes_tree_AA

− 11,620.825

0.0033

0.0062

0.0007

MAX1

Raxml_tree_AA

− 11,556.029

0.8381

0.9544

0.848

MAX1

IQ_tree_Nucl

− 11,570.886

0.1619

0.2706

0.1579

CCD7

Phylobayes_tree_AA

− 15,752.52

0.1431

0.2475

0.16

CCD7

Raxml_tree_AA

− 15,742.717

0.8569

0.9674

0.9133

CCD7

IQ_tree_Nucl

− 15,785.588

0.0353

0.047

0.0359

CCD8

Phylobayes_tree_AA

− 11,524.537

0.0427

0.0642

0.0205

CCD8

Raxml_tree_AA

− 11,514.983

0.957

0.998

0.981

CCD8

IQ_tree_Nucl

− 11,621.601

0.0013

0.0015

0.0000293

SMXL

Phylobayes_tree_AA

− 62,476.375

0.0058

0.0106

0.0077

SMXL

Raxml_tree_AA

− 62,393.986

0.9942

0.9992

0.9923

SMXL

RAxML_tree_Nucl

− 62,710.892

0

0

0

  1. Loglikelihood (logL) per topology, as well as p value for weighted KH test (p-WKH); p value for weighted SH test (p-WSH) and p value for the Approximately Unbiased test (p-AU) as calculated in IQ-tree. Highlighted in grey are the non-rejected hypotheses. See the ‘Materials and methods’ section for further details