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Table 1 MULTI-seq and SCMK classification performance summary

From: No detectable alloreactive transcriptional responses under standard sample preparation conditions during donor-multiplexed single-cell RNA sequencing of peripheral blood mononuclear cells

Method

MULTI-seq

SCMK

% Unclassified (deMULTIplex)

1.5%

36.2%

% Unclassified (demuxEM)

2.8%

35.4%

% souporcell Donor Match (deMULTIplex)

99.9%

99.0%

% souporcell Donor Match (demuxEM)

98.8%

97.7%

  1. Classification performance was determined using two statistics: (i) % Unclassified, proportion of cells classified into donor groups by souporcell that remain unclassified by MULTI-seq or SCMK; (ii) % Donor Match, proportion of cells classified into the same donor group by MULTI-seq or SCMK and souporcell. Both metrics were computed using results from both deMULTIplex and demuxEM
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BMC Biology

ISSN: 1741-7007

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