Table 4 Examples of deduced duplexes of Serendipita indica sRNAs and their downregulated targets in Brachypodium distachyon
sRNA name | sRNA Expression | Target transcript | Description | Transcript expression |
|---|---|---|---|---|
SisRNA 1 | NA | BdiBd21-3.1G0887100.1 | Homologous to Arabidopsis pseudo-response regulator 3 and 7 | − 1.63 |
BdiBd21-3.2G0440200.1 | Serine-carboxypeptidase-like 26-related | − 0.81 | ||
SisRNA 2 | NA | BdiBd21-3.1G0399200.1 | bZIP transcription factor | − 1.00 |
SisRNA 3 | NA | BdiBd21-3.2G0288400.1 | LURP1-related | − 1.20 |
SisRNA 4 | NA | BdiBd21-3.1G0475100.1 | Zinc-finger of the FCS-type | − 1.00 |
SisRNA 5 | 0.13 | BdiBd21-3.1G0047100.1 | Nitrogen metabolic regulation protein NMR-related | − 0.78 |
SisRNA 6 | 1.35 | BdiBd21-3.3G0750900.1 | Peroxygenase | − 0.77 |
SisRNA 7 | NA | BdiBd21-3.1G0917100.1 | Enolase | − 0.52 |
SisRNA 8 | NA | BdiBd21-3.4G0303000.1 | Protein kinase domain protein | − 1.31 |
SisRNA 9 | NA | BdiBd21-3.1G0759800.1 | Carboxyl-esterase 15 related | − 0.86 |
SisRNA 10 | NA | BdiBd21-3.1G0813200.1 | GRAS transcription factor | − 1.95 |
SisRNA 11 | NA | BdiBd21-3.1G1017200.1 | Expansin-like related | − 0.84 |
SisRNA 12 | NA | BdiBd21-3.3G0134800.1 | Copper transport protein ATOX1-related | − 1.11 |
SisRNA 13 | 1.95 | BdiBd21-3.2G0288400.1 | LURP1-related | − 1.20 |
SisRNA 14 | NA | BdiBd21-3.1G0917100.1 | Enolase | − 0.52 |
SisRNA 15 | NA | BdiBd21-3.4G0303000.1 | Protein kinase domain protein | − 1.31 |
NA | BdiBd21-3.1G0411900.1 | Serine-type carboxypeptidase activity (Blast2GO) | − 0.82 | |
SisRNA 16 | NA | BdiBd21-3.4G0507800.1 | MYB transcrition factor | − 0.70 |
SisRNA 17 | NA | BdiBd21-3.1G0411900.1 | Serine-type carboxypeptidase activity (Blast2GO) | − 0.82 |
SisRNA 18 | NA | BdiBd21-3.2G0269000.1 | Mannose-binding lectin family | − 0.85 |
SisRNA 19 | NA | BdiBd21-3.3G0264400.1 | Homologous to barley CONSTANS-like protein CO8 | − 1.93 |
SisRNA 20 | NA | BdiBd21-3.5G0237900.1 | Aquaporin transporter | − 1.02 |