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Table 1 Genomic coordinates, lengths and GC content of the centromeric regions for each Pgt chromosome of the A and B haplotypes

From: The stem rust fungus Puccinia graminis f. sp. tritici induces centromeric small RNAs during late infection that are associated with genome-wide DNA methylation

Chromosome

Centromeric region

Centromere length

GC content (centromere/non-centromere)

1A

2.18–2.45 MB

270 kb

40.6%/43.7%

1B

2.44–2.72 MB

280 kb

41.9%/43.6%

2A

1.66–1.93 MB

270 kb

40.9%/43.8%

2B

1.56–1.83 MB

270 kb

41.8%/43.7%

3A

1.87–2.09 MB

220 kb

41.9%/43.8%

3B

1.92–2.26 MB

340 kb

43.4%/43.3%

4A

3.06–3.34 MB

280 kb

42.1%/43.7%

4B

3.33–3.64 MB

310 kb

42.6%/43.5%

5A

4.38–4.65 MB

270 kb

42.3%/43.8%

5B

6.01–6.23 MB

220 kb

42.4%/43.9%

6A

1.30–1.62 MB

320 kb

43.3%/43.5%

6B

1.15–1.49 MB

340 kb

42.8%/43.2%

7A

1.74–2.04 MB

300 kb

41.9%/43.6%

7B

1.94–2.18 MB

240 kb

41.1%/43.4%

8A

1.24–1.52 MB

280 kb

41.6%/43.6%

8B

1.28–1.55 MB

270 kb

42.5%/43.9%

9A

1.93–2.16 MB

230 kb

41.9%/44.0%

9B

2.12–2.36 MB

240 kb

41.9%/43.7%

10A

1.37–1.66 MB

290 kb

42.8%/43.7%

10B

1.98–2.25 MB

270 kb

42.9%/43.4%

11A

3.5–3.6 MB

100 kb

40.5%/43.8%

11B

3.82–3.93 MB

110 kb

40.5%/43.7%

12A

2.85–3.13 MB

280 kb

41.8%/43.6%

12B

2.82–3.08 MB

260 kb

40.8%/43.5%

13A

1.9–2.14 MB

240 kb

41.7%/43.5%

13B

2.06–2.28 MB

220 kb

41.4%/43.6%

14A

2.13–2.44 MB

310 kb

42.0%/43.6%

14B

2.25–2.48 MB

230 kb

42.8%/43.4%

15A

2.62–2.78 MB

160 kb

42.5%/43.6%

15B

2.52–2.81 MB

290 kb

41.3%/43.5%

16A

2.3–2.54 MB

240 kb

41.0%/43.9%

16B

2.26–2.55 MB

290 kb

42.5%/43.7%

17A

2.35–2.52 MB

170 kb

42.5%/43.7%

17B

2.18–2.45 MB

270 kb

41.5%/43.7%

18A

1.79–2.02 MB

230 kb

43.3%/43.7%

18B

2.02–2.22 MB

200 kb

42.3%/43.4%