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Fig. 3 | BMC Biology

Fig. 3

From: Large-scale data analysis for robotic yeast one-hybrid platforms and multi-disciplinary studies using GateMultiplex

Fig. 3

Graphical user interface (GUI). a The diagram of the GUI of GM_Basic (see Additional file 2 for the exact appearance of GUIs). The GUI contains three main areas, including the input file information, the cutoff setting and the output file selection. The input file information area is used to identify “SampleName,” “Treatment,” and “Signal” from the input files. The cutoff setting area includes background noise cutoff, reference cutoff, bio-replicate cutoff, and tech-replicate cutoff. The output file selection area offers two kinds of output files, the result file, and the fold-change file. The input file information area and the cutoff setting area were designed with clicking buttons (colored in blue). The output file selection area was designed with drop-down lists to provide on or off options. When the buttons are clicked, b–d the corresponding windows would pop up. Three pop-up windows are shown here as examples, including (b) the “SampleName” window, (c) the “Treatment” window, and (d) the reference cutoff setting window. The required information can be selected in (b) the “SampleName” window and (c) the “Treatment” window. d In reference cutoff setting window, dialog boxes (colored in yellow) are used for entering required numbers or words. After inputting all required information into GUI, pressing the “GO!” button (a) would start the data analyzing process

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