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Table 1 The ten diel genes with the highest amplitudes (daily fold change) in females, males and male heads

From: Daily rhythms in gene expression of the human parasite Schistosoma mansoni

Dataset

Gene ID

Gene description

Daily fold change

Phase (ZT)

JTK BH.Q

Female

Smp_072330

Heat shock protein 90

2.30

14.5

0.00032

Smp_326610

Trematode eggshell synthesis domain-containing protein

1.56

6.5

0.00191

Smp_004780

FKBP-type peptidylprolyl isomerase (PPIase)

1.41

16.5

0.00019

Smp_044850

Ribokinase

1.41

16.5

0.00770

Smp_342000

FMRFamide-activated amiloride-sensitive sodium channel

1.38

8.5

0.00191

Smp_069130

Heat shock protein 70 (Hsp70)-4

1.35

14.5

0.00029

Smp_319380

n/a

1.33

2.5

0.00362

Smp_244190

ZP domain-containing protein

1.31

14.5

0.00588

Smp_340010

Putative eggshell protein

1.30

4.5

0.00235

Smp_064860

Putative heat shock protein 70 (Hsp70)-interacting protein

1.30

16.5

7.92E−05

Male

Smp_307450

SmKI-1, a BPTI/Kunitz protease inhibitor domain protein

1.83

4.5

0.00311

Smp_049550

Putative heat shock protein 70 (Hsp70)

1.62

16.5

1.21E−06

Smp_324960

Hypothetical protein

1.57

18.5

0.00112

Smp_327270

Very-long-chain 3-oxoacyl-CoA reductase

1.52

18.5

0.00763

Smp_327260

Transmembrane protein 45B

1.49

18.5

0.00468

Smp_013950

Solute carrier family 43 member 3

1.48

0.5

0.00112

Smp_328570

n/a

1.48

4.5

0.00763

Smp_327240

Hypothetical protein

1.45

18.5

0.00651

Smp_004780

FKBP-type Peptidylprolyl isomerase (PPIase)

1.36

16.5

7.31E−05

Smp_013790

Probable ATP-dependent RNA helicase, DDX5

1.35

0.5

0.00047

Male head

Smp_049550

Putative heat shock protein 70 (Hsp70)

1.63

16.5

1.43E−05

Smp_004780

FKBP-type peptidylprolyl isomerase (PPIase)

1.35

16.5

0.00055

Smp_145560

Monocarboxylate transporter 9

1.33

2.5

0.00236

Smp_124820

Putative chromosome region maintenance protein 1/exportin

1.30

18.5

0.00236

Smp_069130

Heat shock protein 70 (Hsp70)-4

1.30

16.5

0.00236

Smp_333170

85/88 kDa calcium-independent phospholipase A2

1.28

18.5

0.00188

Smp_113620

Serine/arginine-rich splicing factor 2

1.27

16.5

0.00297

Smp_049600

Putative DNAj (Hsp40) homologue, subfamily C, member 3

1.25

16.5

7.31E−05

Smp_214080

VEZF1/Protein suppressor of hairy wing/Zld/ C2H2-type

1.25

16.5

7.49E−06

Smp_246230

Nicotinate-nucleotide pyrophosphorylase

1.24

16.5

0.00035

  1. The ten diel genes with the greatest fold change in expression over a 24-h period were identified by ranking the diel genes by fold change in each dataset. Their daily fold change, peak phase of expression (zeitgeber time, ZT, bold = night) and significance of 24-h rhythmicity determined using JTK_Cycle are presented
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BMC Biology

ISSN: 1741-7007

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