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Table 1 The proteins identified by LC-MS/MS following GATD3A:FLAG immunoprecipitation

From: GATD3A, a mitochondrial deglycase with evolutionary origins from gammaproteobacteria, restricts the formation of advanced glycation end products

Accession Description # Peptides # PSMs
Gatd3a Glutamine amidotransferase-like class 1 domain-containing protein 3A 24 351
Lrpprc Leucine-rich PPR motif-containing protein, mitochondrial 33 79
Hspa9 Stress-70 protein, mitochondrial 25 77
Ighg1 Ig gamma-1 chain C region, membrane-bound form 15 71
Atp5b ATP synthase subunit beta, mitochondrial 19 56
Hspa5 Endoplasmic reticulum chaperone BiP 21 51
Aldh1l2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase 20 48
Tufm Elongation factor Tu, mitochondrial 14 36
Igkc Immunoglobulin kappa constant 2 4 32
Cycs Cytochrome c, somatic 10 31
Hbb-b1 Hemoglobin subunit beta-1 7 29
Hba Hemoglobin subunit alpha 4 29
Atp5a1 ATP synthase subunit alpha, mitochondrial 11 26
Mdh2 Malate dehydrogenase, mitochondrial 10 25
Flna Filamin-A 12 25
Acadl Long-chain-specific acyl-CoA dehydrogenase, mitochondrial 9 23
Prmt5 Protein arginine N-methyltransferase 5 9 21
Hadha Trifunctional enzyme subunit alpha, mitochondrial 8 19
Aco2 Aconitate hydratase, mitochondrial 7 17
Wdr77 Methylosome protein 50 7 17
Ppib Peptidyl-prolyl cis-trans isomerase B 5 16
Hspd1 60 kDa heat shock protein, mitochondrial 7 16
Hadhb Trifunctional enzyme subunit beta, mitochondrial 7 16
Slc25a4 ADP/ATP translocase 1 8 15
Vcp Transitional endoplasmic reticulum ATPase 8 14
Hbb-b2 Hemoglobin subunit beta-2 5 13
Hspa8 Heat shock cognate 71 kDa protein 5 12
Fkbp3 Peptidyl-prolyl cis-trans isomerase FKBP3 6 11
Pcca Propionyl-CoA carboxylase alpha chain, mitochondrial 5 11
Dsp Desmoplakin 10 11
Eef1a2 Elongation factor 1-alpha 2 5 10
  1. Only proteins with peptide spectral match (PSM) of > 10 are shown. Co-immunoprecipitation was performed three times using anti-FLAG antibody from heart mitochondria of Gatd3aFLAG/FLAG mice