Table 2 Description of piRNA clusters in the B chromosome
From: First characterization of PIWI-interacting RNA clusters in a cichlid fish with a B chromosome
piRNA cluster name | piRNA cluster ID | Size (bp) | Reference genome localization | TE enrichment | T:S | RT–PCR of gonads |
|---|---|---|---|---|---|---|
curupira-59920 | 263 | 1027 | NODE_59920 | Retroelement (LTR/PAO) | Mono:+ | B+ samples |
curupira-138667 | 19 | 4986 | NODE_138667 | Retroelement (LTR/DIRS) | Mono:+ | Upregulated in B+ females |
curupira-330285 | 131 | 8024 | NODE_330285 | Transposon and retrotransposon (DNA/hAT, LINE/L2) | Di:+/− | B+ samples |