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Fig. 3 | BMC Biology

Fig. 3

From: Prediction of protein solubility based on sequence physicochemical patterns and distributed representation information with DeepSoluE

Fig. 3

Feature contribution and dependency analysis. A The 20 most important features. B Summary plot for SHAP values. For each feature, one point corresponds to a single sample. The SHAP value along the x-axis represents the impact that feature had on the model’s output for that specific sample. Features in the higher position in the plot indicate the more important it is for the model. C–J SHAP dependence plots. These plots show the effect that a single feature has on the model predictions and the interaction effects across features. Each point corresponds to an individual sample, the value along the x-axis corresponds to the feature value, and the color represents the value of the interacting feature

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