Hours depleted | 0 | 3 | 6 | 12 | 12 + 24-h washout | 24 | 24 [RNA-seq] |
---|
mRNAs up | 3 | 58 | 214 | 1366 | 1815 | 5398 | 3977 |
mRNAs down | 53 | 5 | 174 | 1932 | 1427 | 5000 | 3781 |
- Control samples and SPT16-depleted samples were separately pooled between cell lines for downstream analyses. Only transcripts with an adjusted p-value of < 0.05 are displayed (analyzed with DESeq2)