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Table 1 Studied Leptomonas pyrrhocoris isolates: geographic origin and detection of viruses

From: Diversity of RNA viruses in the cosmopolitan monoxenous trypanosomatid Leptomonas pyrrhocoris

Country

City

Trypanosomatid prevalence

Positive for dsRNA/tested

Isolate

Fragments on the gel [kb]

Viral identity

NGS

Belarus

Vitebsk

8/8 (100%)

1/3

BY-Vi257

   

BY-Vi260

3.5, 2.2

TLV

Yes

BY-Vi262

   

Czechia

Benešov

4/7 (57%)

0/2

CZ-Be02

   

CZ-Be04

   

Brno

7/10 (70%)

2/3

CZ-Br01

3.5, 2.2

TLV

 

CZ-Br02

3.5, 2.2

TLV, OVa, LBV1/2/4a

Yes

CZ-Br07

   

České Budějovice

16/25 (64%)

0/4

CZ-CB02

   

CZ-CB03

   

CZ-CB13

   

CZ-CB16

   

Hradec nad Moravicí

12/16 (75%)

9/9

CZ-HM01

3.5, 2.2

TLV, LBV3a

Yes

CZ-HM02

3.5, 2.2

TLV

Yes

CZ-HM03

3.5, 2.2

TLV

 

CZ-HM04

3.5, 2.2

TLV

Yes

CZ-HM05

3.5, 2.2

TLV

 

CZ-HM06

3.5, 2.2

TLV

Yes

CZ-HM07

3.5, 2.3

TLV

 

CZ-HM08

3.5, 2.2

TLV

Yes

CZ-HM09

3.5, 2.2

TLV

Yes

Ostrava

24/30 (80%)

11/13

CZ-Os00

3.5, 2.2

TLV

 

CZ-Os01

3.5, 2.2

TLV

 

CZ-Os02

3.5, 2.2

TLV

 

CZ-Os03

3.5, 2.2

TLV

Yes

CZ-Os05

3.5, 2.2

TLV

 

CZ-Os07

3.5, 2.2

TLV

 

CZ-Os08

3.5, 2.2

TLV

 

CZ-Os10

3.5, 2.2, 5, 4.2, 4, 3, 2.4, 1.6, 1.3

TLV, OV

 

CZ-Os11

3.5, 2.2

TLV

Yes

CZ-Os12

3.5, 2.2

TLV

 

CZ-Os13

   

CZ-Os14

   

CZ-Os15

3.5, 2.2, 5.0, 4.2, 4.0, 3.0, 2.4, 1.6, 1.3

TLV, OV

 

Prague

12/21 (57%)

1/3

CZ-Pr02

   

CZ-Pr14

3.5, 2.2, 5.0, 4.2, 4.0, 3.0, 2.4, 1.6, 1.3, 6.2, 1.9, 1.5

TLV, OV, LBV3

Yes

Cz-Pr24

   

Germany

Jena

3/4 (75%)

1/1

DE-Je02

3.5, 2.2

TLV

Yes

Hungary

Varbó

10/16 (62%)

2/3

HU-Va04

3.5, 2.2

TLV

Yes

HU-Va05

6.2, 1.9, 1.5

LBV3

Yes

HU-Va09

   

Italy

Grosseto

11/28 (39%)

2/3

IT-Gr06

3.5, 2.2

TLV

 

IT-Gr07

3.5, 2.2

TLV

 

IT-Gr10

   

Rome

8/30 (27%)

6/8

IT-Ro01

3.5, 2.2

TLV

Yes

IT-Ro02

3.5, 2.2

TLV

 

IT-Ro03

   

IT-Ro04

3.5, 2.2

TLV

 

IT-Ro05

   

IT-Ro06

3.5, 2.2

TLV

Yes

IT-Ro07

3.5, 2.2

TLV

 

IT-Ro08

3.5, 2.2

TLV

 

Lithuania

Vilnius

8/8 (100%)

3/3

LT-Vi06

3.5, 2.2

TLV

Yes

LT-Vi08

3.5, 2.2

TLV

Yes

LT-Vi09

3.5, 2.2, 6.2, 1.9, 1.5

TLV, LBV3

Yes

Poland

Rzeszów

18/20 (90%)

3/6

PL-Rz05

   

PL-Rz06

3.5, 2.2, 5.0, 4.2, 4.0, 3.0, 2.4, 1.6, 1.3, 6.2, 1.9, 1.5

TLV, OV, LBV3

Yes

PL-Rz11

   

PL-Rz12

   

PL-Rz13

3.5, 2.2

TLV

Yes

PL-Rz18

6.2, 1.9, 1.5

LBV3

Yes

Portugal

Lisbon

6/13 (46%)

4/5

PT-Li02

3.5, 2.2

TLV

 

PT-Li03

3.5, 2.2

TLV

Yes

PT-Li04

3.5, 2.2

TLV

 

PT-Li05

   

PT-Li06

3.5, 2.2, 6.2, 3.2, 1.8

TLV, LBV4

Yes

Romania

Luncavița

2/6 (33%)

1/1

RO-Lu01

3.5, 2.2

TLV

 

Russia

Borisovka

8/8 (100%)

0/1

RU-Bo01

   

Krasnodar

11/11 (100%)

1/2

RU-Kr01

3.5, 2.2, 6.2, 1.9, 1.5

TLV, LBV3, OVa

Yes

RU-Kr02

   

Moscow

14/17 (82%)

4/4

RU-Mo01

3.5, 2.2

TLV

Yes

RU-Mo02

3.5, 2.2

TLV

Yes

RU-Mo202

3.5, 2.2

TLV

 

RU-Mo203

3.5, 2.2

TLV

Yes

Pskov

92/92 (100%)

0/3

RU-Ps01

   

RU-Ps02

   

RU-Ps03

   

Suyda

10/11 (91%)

1/1

RU-Su01

3.5, 2.2

TLV

Yes

Serbia

Dimitrovgrad

12/15 (80%)

2/4

SE-Dm02

   

SE-Dm03

   

SE-Dm04

3.5, 2.2

TLV

Yes

SE-Dm07

3.5, 2.2, 6.2

TLV, LBVb,c

 

Subotica

10/13 (77%)

3/7

SE-Sb01

   

SE-Sb02

3.5, 2.2, 6.2, 1.9, 1.5

TLV, LBV2/3/4

Yes

SE-Sb03

   

SE-Sb04

   

SE-Sb06

3.5, 2.2

TLV

 

SE-Sb07

3.5, 2.2, 6.2, 1.9, 1.5

TLV, QINa, LBV2/3/4

Yes

SE-Sb09

   

Slovakia

Bratislava

25/30 (83%)

4/5

SK-Br02

3.5, 2.2, 6.2

TLV, LBV2b

Yes

SK-Br05

3.5, 2.2

TLV

Yes

SK-Br18

3.5, 2.2

TLV

 

SK-Br20

3.5, 2.2

TLV

 

SK-Br24

   

Košice

9/20 (45%)

0/1

SKK6

   

Liptovský Hrádok

7/10 (70%)

0/3

SK-LH01

   

SK-LH04

   

SK-LH06

   

Ľubochňa

18/25 (72%)

0/4

SK-Lu01

   

SK-Lu10

   

SK-Lu15

   

SK-Lu16

   

Ukraine

Zaporizhzhia

9/14 (64%)

3/4

UA-Zp01

3.5, 2.2, 5.0, 4.2, 4.0, 3.0, 2.4, 1.6, 1.3

TLV, OV

Yes

UA-Zp02

3.5, 2.2

TLV, OVa, QINa

Yes

UA-Zp03

3.5, 2.2

TLV

Yes

UA-Zp04

   

Total

 

374/508 (74%)

64/106 (60%)

  

61 TLV, 13 LBV, 8 OV, 2 QIN

37

  1. aNo fragments detected on the gel
  2. bOnly the large segment detected on the gel
  3. cThe viral species could not be identified in the absence of sequence data