Dethlefsen L, McFall-Ngai M, Relman DA: An ecological and evolutionary perspective on human-microbe mutualism and disease. Nature. 2007, 449 (7164): 811-818. 10.1038/nature06245.
Article
CAS
PubMed
Google Scholar
Vianna ME, Holtgraewe S, Seyfarth I, Conrads G, Horz HP: Quantitative analysis of three hydrogenotrophic microbial groups, methanogenic archaea, sulfate-reducing bacteria, and acetogenic bacteria, within plaque biofilms associated with human periodontal disease. J Bacteriol. 2008, 190 (10): 3779-3785. 10.1128/JB.01861-07.
Article
PubMed Central
CAS
PubMed
Google Scholar
Lepp PW, Brinig MM, Ouverney CC, Palm K, Armitage GC, Relman DA: Methanogenic Archaea and human periodontal disease. Proc Natl Acad Sci USA. 2004, 101 (16): 6176-6181. 10.1073/pnas.0308766101.
Article
PubMed Central
CAS
PubMed
Google Scholar
Gibson GR, Cummings JH, Macfarlane GT, Allison C, Segal I, Vorster HH, Walker ARP: Alternative Pathways for Hydrogen Disposal During Fermentation in the Human Colon. Gut. 1990, 31 (6): 679-683. 10.1136/gut.31.6.679.
Article
PubMed Central
CAS
PubMed
Google Scholar
Egert M, de Graaf AA, Smidt H, de Vos WM, Venema K: Beyond diversity: functional microbiomics of the human colon. Trends Microbiol. 2006, 14 (2): 86-91. 10.1016/j.tim.2005.12.007.
Article
CAS
PubMed
Google Scholar
Zumft WG: Cell biology and molecular basis of denitrification. Microbiol Mol Biol Rev. 1997, 61 (4): 533-
PubMed Central
CAS
PubMed
Google Scholar
Lundberg JO, Weitzberg E, Cole JA, Benjamin N: Opinion - Nitrate, bacteria and human health. Nat Rev Microbiol. 2004, 2 (7): 593-602. 10.1038/nrmicro929.
Article
CAS
PubMed
Google Scholar
Lundberg JO, Weitzberg E, Gladwin MT: The nitrate-nitrite-nitric oxide pathway in physiology and therapeutics. Nat Rev Drug Discov. 2008, 7 (2): 156-167. 10.1038/nrd2466.
Article
CAS
PubMed
Google Scholar
Straub KL, Benz M, Schink B, Widdel F: Anaerobic, nitrate-dependent microbial oxidation of ferrous iron. Appl Environ Microbiol. 1996, 62 (4): 1458-1460.
PubMed Central
CAS
PubMed
Google Scholar
Baumann B, Snozzi M, Zehnder AJB, vanderMeer JR: Dynamics of denitrification activity of Paracoccus denitrificans in continuous culture during aerobic-anaerobic changes. J Bacteriol. 1996, 178 (15): 4367-4374.
PubMed Central
CAS
PubMed
Google Scholar
Goretski J, Zafiriou OC, Hollocher TC: Steady-State Nitric-Oxide Concentrations During Denitrification. J Biol Chem. 1990, 265 (20): 11535-11538.
CAS
PubMed
Google Scholar
Conrad R: Soil Microbial Processes and the Cycling of Atmospheric Trace Gases. Philos Trans R Soc Lond Ser A-Math Phys Eng Sci. 1995, 351 (1696): 219-230. 10.1098/rsta.1995.0030.
Article
CAS
Google Scholar
Schreiber F, Loeffler B, Polerecky L, Kuypers MMM, de Beer D: Mechanisms of transient nitric oxide and nitrous oxide production in a complex biofilm. Isme J. 2009, 3 (11): 1301-1313. 10.1038/ismej.2009.55.
Article
CAS
PubMed
Google Scholar
Stief P, Poulsen M, Nielsen LP, Brix H, Schramm A: Nitrous oxide emission by aquatic macrofauna. Proc Natl Acad Sci USA. 2009, 106 (11): 4296-4300. 10.1073/pnas.0808228106.
Article
PubMed Central
CAS
PubMed
Google Scholar
Horn MA, Schramm A, Drake HL: The earthworm gut: An ideal habitat for ingested N2O-producing microorganisms. Appl Environ Microbiol. 2003, 69 (3): 1662-1669. 10.1128/AEM.69.3.1662-1669.2003.
Article
PubMed Central
CAS
PubMed
Google Scholar
Kolenbrander PE, Andersen RN, Blehert DS, Egland PG, Foster JS, Palmer RJ: Communication among oral bacteria. Microbiol Mol Biol Rev. 2002, 66 (3): 486-10.1128/MMBR.66.3.486-505.2002.
Article
PubMed Central
CAS
PubMed
Google Scholar
Doel JJ, Benjamin N, Hector MP, Rogers M, Allaker RP: Evaluation of bacterial nitrate reduction in the human oral cavity. Eur J Oral Sci. 2005, 113 (1): 14-19. 10.1111/j.1600-0722.2004.00184.x.
Article
CAS
PubMed
Google Scholar
Duncan C, Dougall H, Johnston P, Green S, Brogan R, Leifert C, Smith L, Golden M, Benjamin N: Chemical Generation of Nitric-Oxide in the Mouth from the Enterosalivary Circulation of Dietary Nitrate. Nat Med. 1995, 1 (6): 546-551. 10.1038/nm0695-546.
Article
CAS
PubMed
Google Scholar
Bayindir YZ, Polat MF, Seven N: Nitric oxide concentrations in saliva and dental plaque in relation to caries experience and oral hygiene. Caries Research. 2005, 39 (2): 130-133. 10.1159/000083158.
Article
CAS
PubMed
Google Scholar
Carossa S, Pera P, Doglio P, Lombardo S, Colagrande P, Brussino L, Rolla G, Bucca C: Oral nitric oxide during plaque deposition. Eur J Clin Invest. 2001, 31 (10): 876-879. 10.1046/j.1365-2362.2001.00902.x.
Article
CAS
PubMed
Google Scholar
Aurer A, Aleksic J, Ivic-Kardum M, Aurer J, Culo F: Nitric oxide synthesis is decreased in periodontitis. J Clin Periodontol. 2001, 28 (6): 565-568. 10.1034/j.1600-051x.2001.028006565.x.
Article
CAS
PubMed
Google Scholar
Selwitz RH, Ismail AI, Pitts NB: Dental caries. Lancet. 2007, 369 (9555): 51-59. 10.1016/S0140-6736(07)60031-2.
Article
CAS
PubMed
Google Scholar
Pihlstrom BL, Michalowicz BS, Johnson NW: Periodontal diseases. Lancet. 2005, 366 (9499): 1809-1820. 10.1016/S0140-6736(05)67728-8.
Article
PubMed
Google Scholar
Kendall HK, Marshall RI, Bartold PM: Nitric oxide and tissue destruction. Oral Dis. 2001, 7 (1): 2-10. 10.1034/j.1601-0825.2001.70102.x.
Article
CAS
PubMed
Google Scholar
Brennan PA, Thomas GJ, Langdon JD: The role of nitric oxide in oral diseases. Arch Oral Biol. 2003, 48 (2): 93-100. 10.1016/S0003-9969(02)00183-8.
Article
CAS
PubMed
Google Scholar
Bogdan C: Nitric oxide and the immune response. Nat Immunol. 2001, 2 (10): 907-916. 10.1038/ni1001-907.
Article
CAS
PubMed
Google Scholar
Ugar-Cankal D, Ozmeric N: A multifaceted molecule, nitric oxide in oral and periodontal diseases. Clin Chim Acta. 2006, 366 (1-2): 90-100. 10.1016/j.cca.2005.10.018.
Article
CAS
PubMed
Google Scholar
Schreiber F, Polerecky L, de Beer D: Nitric oxide microsensor for high spatial resolution measurements in biofilms and sediments. Anal Chem. 2008, 80 (4): 1152-1158. 10.1021/ac071563x.
Article
CAS
PubMed
Google Scholar
Cooper CE: Nitric oxide and cytochrome oxidase: substrate, inhibitor or effector?. Trends BiochemSci. 2002, 27 (1): 33-39. 10.1016/S0968-0004(01)02035-7.
Article
CAS
Google Scholar
Stevanin TM, Ioannidis N, Mills CE, Kim SO, Hughes MN, Poole RK: Flavohemoglobin hmp affords inducible protection for Escherichia coli respiration, catalyzed by cytochromes bo ' or bd, from nitric oxide. J Biol Chem. 2000, 275 (46): 35868-35875. 10.1074/jbc.M002471200.
Article
CAS
PubMed
Google Scholar
Parham NJ, Gibson GR: Microbes involved in dissimilatory nitrate reduction in the human large intestine. FEMS Microbiol Ecol. 2000, 31 (1): 21-28. 10.1111/j.1574-6941.2000.tb00667.x.
Article
CAS
PubMed
Google Scholar
Mohan SB, Cole JA: The Dissimilatory Reduction of Nitrate to Ammonia by Anaerobic Bacteria. The Biology of the Nitrogen Cycle. Edited by: Bothe H, Ferguson SJ, Newton WE. 2007, Amsterdam: Elsevier, 1
Google Scholar
Lam P, Lavik G, Jensen MM, Vossenberg van de J, Schmid M, Woebken D, Dimitri G, Amann R, Jetten MSM, Kuypers MMM: Revising the nitrogen cycle in the Peruvian oxygen minimum zone. Proc Natl Acad Sci USA. 2009, 106 (12): 4752-4757. 10.1073/pnas.0812444106.
Article
PubMed Central
CAS
PubMed
Google Scholar
Hall-Stoodley L, Costerton JW, Stoodley P: Bacterial biofilms: From the natural environment to infectious diseases. Nat Rev Microbiol. 2004, 2 (2): 95-108. 10.1038/nrmicro821.
Article
CAS
PubMed
Google Scholar
Visek WJ: Diet and Cell-Growth Modulation by Ammonia. Am J Clin Nutr. 1978, 31 (10): S216-S220.
CAS
PubMed
Google Scholar
Lloyd D: Aerobic Denitrification in Soils and Sediments - from Fallacies to Facts. Trends Ecol Evol. 1993, 8 (10): 352-356. 10.1016/0169-5347(93)90218-E.
Article
CAS
PubMed
Google Scholar
Gao H, Schreiber F, Collins G, Jensen MM, Kostka JE, Lavik G, de Beer D, Zhou H-y, Kuypers MMM: Aerobic denitrification in permeable Wadden Sea sediments. ISME J. 2009
Google Scholar
Robertson LA, Kuenen JG: Aerobic Denitrification - a Controversy Revived. Arch Microbiol. 1984, 139 (4): 351-354. 10.1007/BF00408378.
Article
CAS
Google Scholar
Zumft WG: Nitric oxide reductases of prokaryotes with emphasis on the respiratory, heme-copper oxidase type. J Inorg Biochem. 2005, 99 (1): 194-215. 10.1016/j.jinorgbio.2004.09.024.
Article
CAS
PubMed
Google Scholar
Barraud N, Hassett DJ, Hwang SH, Rice SA, Kjelleberg S, Webb JS: Involvement of nitric oxide in biofilm dispersal of Pseudomonas aeruginosa. J Bacteriol. 2006, 188 (21): 7344-7353. 10.1128/JB.00779-06.
Article
PubMed Central
CAS
PubMed
Google Scholar
Marsh PD: Are dental diseases examples of ecological catastrophes?. Microbiology-(UK). 2003, 149: 279-294. 10.1099/mic.0.26082-0.
Article
CAS
Google Scholar
Bedioui F, Villeneuve N: Electrochemical nitric oxide sensors for biological samples - Principle, selected examples and applications. Electroanalysis. 2003, 15 (1): 5-18. 10.1002/elan.200390006.
Article
CAS
Google Scholar
Chen KJ, Pittman RN, Popel AS: Nitric oxide in the vasculature: Where does it come from and where does it go? A quantitative perspective. Antioxid Redox Signal. 2008, 10 (7): 1185-1198. 10.1089/ars.2007.1959.
Article
PubMed Central
CAS
PubMed
Google Scholar
Russow R, Neue HU, Wolf I, Plath C: Humans as a source of N2O - Evidences from breath air analysis and N-15 tracer experiments. 3rd International Symposium on Non-CO2 Greenhouse Gases: Jan 21-23 2002; Maastricht, Netherlands. 2002, Millpress Science Publishers, 155-156.
Google Scholar
Mitsui T, Kondo T: Effects of mouth cleansing on the levels of exhaled nitrous oxide in young and older adults. Sci Total Environ. 1998, 224 (1-3): 177-180. 10.1016/S0048-9697(98)00353-2.
Article
CAS
PubMed
Google Scholar
Bleakley BH, Tiedje JM: Nitrous-Oxide Production by Organisms Other Than Nitrifiers or Denitrifiers. Appl Environ Microbiol. 1982, 44 (6): 1342-1348.
PubMed Central
CAS
PubMed
Google Scholar
Crutzen PJ: Role of No and No2 in the Chemistry of the Troposphere and Stratosphere. Annu Rev Earth Planet Sci. 1979, 7: 443-472. 10.1146/annurev.ea.07.050179.002303.
Article
CAS
Google Scholar
IPCC: Climate Change 2001: The Scientific Basis. IPCC Third Assessment Report Climate Change. 2001
Google Scholar
Rolla G, Bruno M, Bommarito L, Heffler E, Ferrero N, Petrarulo M, Bagnis C, Bugiani M, Guida G: Breath analysis in patients with end-stage renal disease: effect of haemodialysis. Eur J Clin Invest. 2008, 38 (10): 728-733. 10.1111/j.1365-2362.2008.02016.x.
Article
CAS
PubMed
Google Scholar
Matsumoto A, Hirata Y, Kakoki M, Nagata D, Momomura S, Sugimoto T, Tagawa H, Omata M: Increased excretion of nitric oxide in exhaled air of patients with chronic renal failure. Clin Sci. 1999, 96 (1): 67-74. 10.1042/CS19980080.
Article
CAS
PubMed
Google Scholar
Zetterquist W, Marteus H, Kalm-Stephens P, Nas E, Nordvall L, Johannesson M, Alving K: Oral bacteria - The missing link to ambiguous findings of exhaled nitrogen oxides in cystic fibrosis. Respir Med. 2009, 103 (2): 187-193. 10.1016/j.rmed.2008.09.009.
Article
PubMed
Google Scholar
Lee N, Nielsen PH, Andreasen KH, Juretschko S, Nielsen JL, Schleifer KH, Wagner M: Combination of fluorescent in situ hybridization and microautoradiography - a new tool for structure-function analyses in microbial ecology. Appl Environ Microbiol. 1999, 65 (3): 1289-1297.
PubMed Central
CAS
PubMed
Google Scholar
Behrens S, Losekann T, Pett-Ridge J, Weber PK, Ng WO, Stevenson BS, Hutcheon ID, Relman DA, Spormann AM: Linking microbial phylogeny to metabolic activity at the single-cell level by using enhanced element labeling-catalyzed reporter deposition fluorescence in situ hybridization (EL-FISH) and NanoSIMS. Appl Environ Microbiol. 2008, 74 (10): 3143-3150. 10.1128/AEM.00191-08.
Article
PubMed Central
CAS
PubMed
Google Scholar
Schramm A: In situ analysis of structure and activity of the nitrifying community in biofilms, aggregates, and sediments. Geomicrobiol J. 2003, 20 (4): 313-333. 10.1080/01490450303893.
Article
CAS
Google Scholar
Kuypers MM, Jorgensen BB: The future of single-cell environmental microbiology. Environ Microbiol. 2007, 9 (1): 6-7. 10.1111/j.1462-2920.2006.01222_5.x.
Article
PubMed
Google Scholar
Turnbaugh PJ, Ley RE, Hamady M, Fraser-Liggett CM, Knight R, Gordon JI: The Human Microbiome Project. Nature. 2007, 449 (7164): 804-810. 10.1038/nature06244.
Article
PubMed Central
CAS
PubMed
Google Scholar
Lowry OH, Rosebrough NJ, Farr AL, Randall RJ: Protein Measurement with the Folin Phenol Reagent. J Biol Chem. 1951, 193 (1): 265-275.
CAS
PubMed
Google Scholar
Andersen K, Kjaer T, Revsbech NP: An oxygen insensitive microsensor for nitrous oxide. Sens Actuator B-Chem. 2001, 81 (1): 42-48. 10.1016/S0925-4005(01)00924-8.
Article
CAS
Google Scholar
Revsbech NP: An Oxygen Microsensor with a Guard Cathode. Limnol Oceanogr. 1989, 34 (2): 474-478.
Article
CAS
Google Scholar
deBeer D, Schramm A, Santegoeds CM, Kuhl M: A nitrite microsensor for profiling environmental biofilms. Appl Environ Microbiol. 1997, 63 (3): 973-977.
CAS
Google Scholar
Parrish KD, Greenberg EP: A Rapid Method for Extraction and Purification of DNA from Dental Plaque. Appl Environ Microbiol. 1995, 61 (11): 4120-4123.
PubMed Central
CAS
PubMed
Google Scholar
Braman RS, Hendrix SA: Nanogram Nitrite and Nitrate Determination in Environmental and Biological-Materials by Vanadium(Iii) Reduction with Chemi-Luminescence Detection. Anal Chem. 1989, 61 (24): 2715-2718. 10.1021/ac00199a007.
Article
CAS
PubMed
Google Scholar